iMK1317 2020-05-16 09:37
Independent Section Contains tests that are independent of the class of modeled organism, a model's complexity or types of identifiers that are used to describe its components. Parameterization or initialization of the network is not required. See readme for more details.

Consistency


Annotation - Metabolites


Annotation - Reactions


Annotation - Genes


Annotation - SBO Terms





Total Score
91%
Score per Category
0%10%20%30%40%50%60%70%80%90%100%scoreconsistencyannotation_metannotation_rxnannotation_geneannotation_sbosection
Specific Section Covers general statistics and specific aspects of a metabolic network that are not universally applicable. See readme for more details.
SBML
Basic Information
Model Identifier
iMK1317

The MIRIAM guidelines require a model to be identified via an ID. Further, the ID will be displayed on the memote snapshot report, which helps to distinguish the output clearly. Implementation: Check if the cobra.Model object has a non-empty "id" attribute, this value is parsed from the "id" attribute of the <model> tag in the SBML file e.g. <model fbc:strict="true" id="iJO1366">.

The model ID is iMK1317


Metabolite Information
Reaction Information
Gene-Protein-Reaction (GPR) Associations
Biomass
Energy Metabolism
Network Topology
Matrix Conditioning
Experimental Data Comparison
Misc. Tests
Environment